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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015860451.1_cds_XP_016514647.1_27077
CDS Infomation

[gene=LOC107831397] [db_xref=GeneID:107831397] [protein=uncharacterized protein LOC107831397 isoform X2] [protein_id=XP_016514647.1] [location=complement(join(26773..26901,26988..27128,27849..27942,28034..28090,28195..28259,28827..29072,29218..29274,29358..29415,29500..29713,32139..32305,32431..32483,32563..32622,32736..32817,32914..33006,33095..33187,33317..33379,35238..35346,35432..35636,35756..35827,36520..37098))] [gbkey=CDS]
Sequence

ATGACGGCAGAAACAAAGCGTGAATTTGACACTTCATCGGTGGCGGAATCGCCGTCTCAA
TCTCGGGTCTTGGAACCCGGTGATCCGAGACGCCATAGGCCGGATGATTGCAAACCGGAA
TTGACCGGTTCGGTTTCCGGCGTTCGGTTCGAGGAAGCTCAGGTTAGGGCTAGTGATAGT
AATGGTATTGTTGTGTACAGGAGGAACAAGAGGCAGAAGACGGCAGATTCAACAAACGGC
AATTCAAGTGGCAAAGTCGTAAATATGGATGAAACGGAGGGTAATTCAGGAATTCACGTG
TTAGACAGTGACGTCATGGAGGTTGAAGTCAAGGAAGAGTCAAGGATTAGGCGGTTCACT
CGGTTAGCTTTGGAGCAGAAGAAGATAGAGCAAATTCCAAATGGAAAATCTGAAGGTGAA
GTTGAGGAGAGAAGTTGTGGTGTAAACATGTCGGGGAGGAAACTAGAAATGAAAATGTCC
AAGAAAATTTCGATAACGGAAAGGCCTACAACGGTTAGGGAGCTGTTCGAGACTGGTTTA
CTGGAAGGCTATCCTGTTTTTTACAATGGTGGGAAGAAGGGAATTCCACTCCGAGGAACA
ATTAAAGATACCGGAATTCTTTGTTCCTGTGATCTGTGCAATGGAACTAGAGTTGTCCCT
CCTAGCAAATTTGAGATCCATGCATGTAATTCATACAGACGTGCATCAGAGTATATCTGT
CTGGAAAATGGCAAGAGCCTACTCGACGTGGTCAAAGAGTGTAAGAAAGGTTCCTTGAAG
ACATTAGAAGAAACAATTCAGAGTATCATTGGTCCAGTTCCTGTGAAGAAAAATCTCATT
TGTCCGAATTGCAAGGGGTCTTTTGTTGCAACGCTAGCTGGAAAAGATGAACAACTTTGT
GATTCATGCATAATTTCTCTAAGACCAGAAGCCACTCCAACAAAGTCGATAAATACTGAA
AATGGGGCCATGGTGATGCATTCAAGTAGAGTCTCTCCTTCAGTGCATACTCTCTCCAGA
AAGAAGAGGTTAATGCAGCCAGCTGTGGCTCCGAAGTCGGCTGGAACTGCTACTGTATGC
AGTTCATTCGGAAACAACATGCAGGACAATATCTCAAAAAAATTGTCAAAATCAATTGCA
GTTTCGAAGTACTCAAAAATTGCTCTGCCTGGTGTCTCAGTACACTCTAGGACCCAATGG
AAAATGACAAAAAGGGATCAAAAGATGCATAAATTGGTTTTTGATGAAGGTGGACTGCCT
GATGGGACTGAAGTAGCTTATTATTCTCGTGGAAAGAAATTGCTTGTTGGTTATAAGAAG
GGATCTGGTATATTCTGTTCTTGCTGCAATATTGAGGTTAGTCCATCTCAGTTTGAAGCT
CATGCAGGTTGGGCATCACGCAAGAAACCTTATGGGTACATTTACACGTCTAATGGAGTA
TCTCTACATGAATTTGCTATATCTCTATTAAAAGGCCGCAAGTCTTCAGTTAAAGACAGT
GATGACTTGTGCATCATATGCGCAGATGGTGGAAAGCTTGTGCTTTGTGATGGATGTCCT
AGGGCTTTCCATAAAGTGTGTGCATCATTACCGGCTATCCCTCGGGGTAAATGGTACTGC
AAGTATTGTGAAAGCATGTTACAGAGGGAGAAGTTTGTGGAGCGCAATGAGAATGCCTTA
GCAGCCGGTAGGGTCTCTGGCACTGATCCCATAGAGCAAATAACAAAACGTTGCATTCGT
ATTGTCAAGAACGCAGAAGAAGCAGAATTTATTGCATGTGTTTTATGCAGAGGTTATGAC
TTTAGCAAGTCTGGTTTTGGTCCACGGACTGTCATCCTATGTGACCAGTGTGAGAAAGAA
TATCATGTTGGCTGCTTAAAGAGAAGCAAGATAGCAGATTTAAAGGAATTGCCTAAAGGA
AAATGGTTCTGTAGTAAGAATTGCAACAAGATCTACTCTGCACTGCAAAGTTTGCTCACC
TCAGGAGAAGAGAGGTTGCCAGATTCTTGCTTGGATGCAATAAGGGTGAAGGAAAAAGAA
AACCGTTTGGCTGCTGTTGGTGAACTTGATGTTAGATGGAGACTTCTAAGTGGCAGAATT
TGCTCTCGTGAAACCAGAAGGCTACTGGCAGAAGCTGTTTCTATCTTCCATGATTGTTTC
GATCCTATTGTTGATTCAGTAACTGGACGTGACTTCATTCCATCTATGGTCTATGGAAGG
AACATTAGGGGCCAAGACTTTGGAGGCATGTATTGCGCTATATTGACTGTAAACTCAACA
GTAGTATCAGCAGGGATCCTCCGGATTTTTGGCCAGGATAGGGCAGAACTCCCTATTGTG
GCAACCCGTGTTGGTAGCCAAGGCAAGGGATACTTTCAGCTGCTGTTCTCCTGCATAGAA
AAATTGCTCTCGTTTTTGGGTGTGAGAAGCTTTGTACTCCCAGCTGCTGTTGAAGCTATG
TCAATATGGACTGAGAAATTTGGATTCCAGGAGTTAACACCAGATCAGCTTGTCCGCTAC
CGAAGAACCTGTTGGCAAATGATTAGCTTTAAAGGCACATCTATGCTGGAAAAGTCGGTC
TCTAGATGTAGAATCATTCAGCAGCGGGAAGCTGAAAATGATGTTCCAGATGAGTAG

Peptide Sequence

PEP ID

XP_016514647.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107831397 isoform X2 [Nicotiana tabacum]
Sequence

MTAETKREFDTSSVAESPSQSRVLEPGDPRRHRPDDCKPELTGSVSGVRFEEAQVRASDS
NGIVVYRRNKRQKTADSTNGNSSGKVVNMDETEGNSGIHVLDSDVMEVEVKEESRIRRFT
RLALEQKKIEQIPNGKSEGEVEERSCGVNMSGRKLEMKMSKKISITERPTTVRELFETGL
LEGYPVFYNGGKKGIPLRGTIKDTGILCSCDLCNGTRVVPPSKFEIHACNSYRRASEYIC
LENGKSLLDVVKECKKGSLKTLEETIQSIIGPVPVKKNLICPNCKGSFVATLAGKDEQLC
DSCIISLRPEATPTKSINTENGAMVMHSSRVSPSVHTLSRKKRLMQPAVAPKSAGTATVC
SSFGNNMQDNISKKLSKSIAVSKYSKIALPGVSVHSRTQWKMTKRDQKMHKLVFDEGGLP
DGTEVAYYSRGKKLLVGYKKGSGIFCSCCNIEVSPSQFEAHAGWASRKKPYGYIYTSNGV
SLHEFAISLLKGRKSSVKDSDDLCIICADGGKLVLCDGCPRAFHKVCASLPAIPRGKWYC
KYCESMLQREKFVERNENALAAGRVSGTDPIEQITKRCIRIVKNAEEAEFIACVLCRGYD
FSKSGFGPRTVILCDQCEKEYHVGCLKRSKIADLKELPKGKWFCSKNCNKIYSALQSLLT
SGEERLPDSCLDAIRVKEKENRLAAVGELDVRWRLLSGRICSRETRRLLAEAVSIFHDCF
DPIVDSVTGRDFIPSMVYGRNIRGQDFGGMYCAILTVNSTVVSAGILRIFGQDRAELPIV
ATRVGSQGKGYFQLLFSCIEKLLSFLGVRSFVLPAAVEAMSIWTEKFGFQELTPDQLVRY
RRTCWQMISFKGTSMLEKSVSRCRIIQQREAENDVPDE

Transcript Sequence

Gene sequence data has not been registered.